2017-8-11 16:0:32025-05-22 13:51:54
locus
BSU07840
BSU_07840
geneLength
4386
4389
outlinks
bsu
BSU07840
BSU_07840
The protein
Catalyzed reaction/ biological activity
degrades c-di-AMP two 5′ AMP molecules [Pubmed|27414497]
degrades c-di-AMP two 5′ AMP molecules [Pubmed|27414497]
nucleoside 2',3'-cyclic phosphate + H2O --> nucleoside 3'-phosphate + H+ (according to UniProt)
ribonucleoside 3'-phosphate + H2O --> ribonucleoside + phosphate (according to UniProt)
ribonucleoside 5'-phosphate + H2O --> ribonucleoside + phosphate (according to UniProt)
The protein
Paralogous protein(s)
[[protein|YhcR]]
[[this]]
The protein
Structure
[PDB|3GVE]
[PDB|2Z1A] (from Thermus thermophilus, 40% identity)
[PDB|3GVE] (fragment, aa 37 - 374)
Biological materials
Mutant
GP2026 (Δ''yfkN::aphA3''), available in [SW|Jörg Stülke]'s lab [Pubmed|27681641]
MGNA-C263 (yfkN::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/2261 NBRP B. subtilis, Japan]
GP2026 (Δ''yfkN::aphA3''), available in [SW|Jörg Stülke]'s lab [Pubmed|27681641]
MGNA-C263 (yfkN::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/2261 NBRP B. subtilis, Japan]
BKE07840 (Δ[[gene|yfkN]]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE07840 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CACCAGTTCTCCACCTTTCA, downstream forward: _UP4_TAAAAAAGAGCTGCTCGCTA
BKK07840 (Δ[[gene|yfkN]]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK07840 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CACCAGTTCTCCACCTTTCA, downstream forward: _UP4_TAAAAAAGAGCTGCTCGCTA
The protein
Protein family
5'-nucleotidase family (with [[protein|YhcR]], according to UniProt)